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Creators/Authors contains: "Jones, Eric"

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  1. Multiphoton emission of electrons has been observed from sharp tips of heavily p-doped GaAs caused by laser pulses with, nominally, 800-nm wavelength, 1-nJ/pulse energy, and 90-fs duration. The emission is mostly due to four-photon processes, with some contribution from three-photon absorption as well. When the electron emission current due to two pulses separated by delay 200 fs << τ << 1 ns is integrated over all electron energies, it is less than that observed for the sum of the emission from the two individual pulses. This subadditive behavior is consistent with a fast electron emission process, i.e., one in which the electron emission occurs over a time comparable to the laser pulse width. The subadditivity results from Pauli blocking of electron emission by the second pulse due to a population increase of the GaAs conduction band caused by the first pulse. Such subadditive photoemission is a sensitive probe of excited-carrier dynamics. We employ the use of an excited-level population model to characterize the photon absorption process and give us a clearer understanding of the electron dynamics in GaAs associated with multiphoton electron emission. Possible applications of this subadditivity effect to control photoemitted electron spin are discussed. 
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  2. Abstract The gut is continuously invaded by diverse bacteria from the diet and the environment, yet microbiome composition is relatively stable over time for host species ranging from mammals to insects, suggesting host-specific factors may selectively maintain key species of bacteria. To investigate host specificity, we used gnotobiotic Drosophila , microbial pulse-chase protocols, and microscopy to investigate the stability of different strains of bacteria in the fly gut. We show that a host-constructed physical niche in the foregut selectively binds bacteria with strain-level specificity, stabilizing their colonization. Primary colonizers saturate the niche and exclude secondary colonizers of the same strain, but initial colonization by Lactobacillus species physically remodels the niche through production of a glycan-rich secretion to favor secondary colonization by unrelated commensals in the Acetobacter genus. Our results provide a mechanistic framework for understanding the establishment and stability of a multi-species intestinal microbiome. 
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  3. Abstract Quantum cellular automata (QCA) evolve qubits in a quantum circuit depending only on the states of their neighborhoods and model how rich physical complexity can emerge from a simple set of underlying dynamical rules. The inability of classical computers to simulate large quantum systems hinders the elucidation of quantum cellular automata, but quantum computers offer an ideal simulation platform. Here, we experimentally realize QCA on a digital quantum processor, simulating a one-dimensional Goldilocks rule on chains of up to 23 superconducting qubits. We calculate calibrated and error-mitigated population dynamics and complex network measures, which indicate the formation of small-world mutual information networks. These networks decohere at fixed circuit depth independent of system size, the largest of which corresponding to 1,056 two-qubit gates. Such computations may enable the employment of QCA in applications like the simulation of strongly-correlated matter or beyond-classical computational demonstrations. 
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  4. We demonstrate spectral broadening and compression of amplified pulses from a titanium sapphire laser system using an argon-filled stretched, hollow-core fiber and an acousto-optic modulator based pulse-shaper. We characterize the pulses using pulse-shaper assisted collinear frequency resolved optical gating, pulse-shaper assisted D-scans, and D-scans using a variable path length water cell. The different compression and characterization approaches consistently compress the pulses down to < 6 fs, less than ∼1 fs from the transform limit. We discuss prospects for pulse shape spectroscopy with these broadband pulses, given our control over the spectral amplitude and phase. 
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  6. Abstract We present an alternative and, for the purpose of non-crystalline materials design, a more suitable description of covalent and ionic glassy solids as statistical ensembles of crystalline local minima on the potential energy surface. Motivated by the concept of partially broken ergodicity, we analytically formulate the set of approximations under which the structural features of ergodic systems such as the radial distribution function (RDF) and powder X-ray diffraction (XRD) intensity can be rigorously expressed as statistical ensemble averages over different local minima. Validation is carried out by evaluating these ensemble averages for elemental Si and SiO2over the local minima obtained through the first-principles random structure sampling that we performed using relatively small simulation cells, thereby restricting the sampling to a set of predominantly crystalline structures. The comparison with XRD and RDF from experiments (amorphous silicon) and molecular dynamics simulations (glassy SiO2) shows excellent agreement, thus supporting the ensemble picture of glasses and opening the door to fully predictive description without the need for experimental inputs. 
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  7. Abstract Course‐based undergraduate research experiences (CUREs) can provide undergraduate students access to research opportunities when student and faculty resources are limited. In addition to expanding research opportunities, CUREs may also be explored as a pedagogical tool for improving student learning of course content and laboratory skills, as well as improving meta‐cognitive features such as confidence. We examined how a 6‐week CURE in an upper‐level undergraduate biochemistry lab affected student gains in content knowledge and confidence in scientific abilities, compared to a non‐CURE section of the same course. We find that gains in content knowledge were similar between CURE and non‐CURE sections, indicating the CURE does not negatively impact student learning. The CURE was associated with a statistically significant gain in student confidence, compared to non‐CURE group. These results show that even a relatively short CURE can be effective in improving student confidence at scientific research skills, in addition to expanding access to research. 
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